Index

_

__del__() (libscientific.cpca.CPCA method) (libscientific.matrix.Matrix method) (libscientific.pca.PCA method) (libscientific.pls.PLS method) (libscientific.tensor.Tensor method) (libscientific.vectlist.DVectorList method) (libscientific.vector.DVector method) (libscientific.vector.UIVector method) __getitem__() (libscientific.matrix.Matrix method) (libscientific.tensor.Tensor method) (libscientific.vectlist.DVectorList method) (libscientific.vector.DVector method) (libscientific.vector.UIVector method)

__init__() (libscientific.cpca.CPCA method) (libscientific.matrix.Matrix method) (libscientific.pca.PCA method) (libscientific.pls.PLS method) (libscientific.tensor.Tensor method) (libscientific.vectlist.DVectorList method) (libscientific.vector.DVector method) (libscientific.vector.UIVector method) __setitem__() (libscientific.matrix.Matrix method) (libscientific.tensor.Tensor method) (libscientific.vectlist.DVectorList method) (libscientific.vector.DVector method) (libscientific.vector.UIVector method) __version__ (in module libscientific)

A

add_tensor_matrix() (in module libscientific.tensor) AddTensorMatrix (C function) append() (libscientific.vectlist.DVectorList method), [1] (libscientific.vector.DVector method), [1] (libscientific.vector.UIVector method), [1]

appendcol() (libscientific.matrix.Matrix method), [1] appendrow() (libscientific.matrix.Matrix method), [1] apply_scaling() (in module libscientific.pls)

B

b (libscientific.pls.PLSMODEL attribute) bias (libscientific.pls.PLSMODEL attribute)

block_expvar (libscientific.cpca.CPCAMODEL attribute) block_loadings (libscientific.cpca.CPCAMODEL attribute) block_scores (libscientific.cpca.CPCAMODEL attribute)

C

col (libscientific.matrix.MATRIX attribute) colaverage (libscientific.cpca.CPCAMODEL attribute) (libscientific.pca.PCAMODEL attribute) colscaling (libscientific.cpca.CPCAMODEL attribute) (libscientific.pca.PCAMODEL attribute) CPCA (C function) (class in libscientific.cpca)

cpca_algorithm() (in module libscientific.cpca) cpca_score_predictor() (in module libscientific.cpca) CPCAMODEL (C struct) (class in libscientific.cpca) CPCAScorePredictor (C function) cubic_spline_interpolation() (in module libscientific.interpolate) cubic_spline_predict() (in module libscientific.interpolate) CubicSplineInterpolation (class in libscientific.interpolate)

D

data (libscientific.matrix.MATRIX attribute) (libscientific.vector.DVECTOR attribute) (libscientific.vector.IVECTOR attribute) (libscientific.vector.STRVECTOR attribute) (libscientific.vector.UIVECTOR attribute) data_ptr() (libscientific.matrix.Matrix method), [1] (libscientific.tensor.Tensor method), [1] (libscientific.vectlist.DVectorList method), [1] (libscientific.vector.DVector method), [1] (libscientific.vector.UIVector method), [1] debug() (libscientific.matrix.Matrix method) (libscientific.tensor.Tensor method), [1] (libscientific.vectlist.DVectorList method), [1] (libscientific.vector.DVector method), [1] (libscientific.vector.UIVector method), [1] del_cpca_model() (in module libscientific.cpca) del_dvector() (in module libscientific.vector) del_dvector_list() (in module libscientific.vectlist) del_ivector() (in module libscientific.vector) del_matrix() (in module libscientific.matrix) del_pca_model() (in module libscientific.pca) del_pls_model() (in module libscientific.pls) del_tensor() (in module libscientific.tensor) del_uivector() (in module libscientific.vector) DelCPCAModel (C function) DelDVector (C function) DelIVector (C function) DelLDAModel (C function) DelMatrix (C function)

DelMLRModel (C function) DelPCAModel (C function) DelPLSModel (C function) DelStrVector (C function) DelTensor (C function) DelUIVector (C function) DelUPCAModel (C function) dmodx (libscientific.pca.PCAMODEL attribute) dvect (libscientific.vector.DVector attribute) DVECTLIST (class in libscientific.vectlist) dvector (C struct) DVECTOR (class in libscientific.vector) DVector (class in libscientific.vector) dvector (libscientific.vectlist.DVECTLIST attribute) dvector_append() (in module libscientific.vector) dvector_copy() (in module libscientific.vector) dvector_has_value() (in module libscientific.vector) dvector_list_append() (in module libscientific.vectlist) dvector_list_tolist() (in module libscientific.vectlist) dvector_matrix_dot_product() (in module libscientific.matrix) dvector_remove_at() (in module libscientific.vector) dvector_resize() (in module libscientific.vector) dvector_set() (in module libscientific.vector) dvector_tolist() (in module libscientific.vector) dvector_transposed_dvector_dot_product() (in module libscientific.matrix) dvector_transposed_matrix_division() (in module libscientific.matrix) DVectorAppend (C function) DVectorList (class in libscientific.vectlist) DVectorRemoveAt (C function) dvl (libscientific.vectlist.DVectorList attribute)

E

evect_eval() (in module libscientific.matrix)

extend() (libscientific.vector.DVector method), [1] (libscientific.vector.UIVector method), [1]

F

fit() (libscientific.cpca.CPCA method), [1] (libscientific.interpolate.CubicSplineInterpolation method) (libscientific.pca.PCA method), [1] (libscientific.pls.PLS method), [1] fromlist() (libscientific.matrix.Matrix method), [1] (libscientific.tensor.Tensor method), [1] (libscientific.vectlist.DVectorList method), [1] (libscientific.vector.DVector method), [1] (libscientific.vector.UIVector method), [1]

fromnumpy() (libscientific.matrix.Matrix method), [1] (libscientific.tensor.Tensor method), [1]

G

get_beta_coefficients() (libscientific.pls.PLS method), [1] get_block_expvar() (libscientific.cpca.CPCA method), [1] get_block_loadings() (libscientific.cpca.CPCA method), [1] get_block_scores() (libscientific.cpca.CPCA method), [1] get_dvector_value() (in module libscientific.vector) get_evect_evals() (libscientific.matrix.Matrix method), [1] get_exp_variance() (libscientific.pca.PCA method), [1] (libscientific.pls.PLS method), [1] get_ivector_value() (in module libscientific.vector) get_loadings() (libscientific.pca.PCA method), [1] get_matrix_column() (in module libscientific.matrix) get_matrix_row() (in module libscientific.matrix) get_matrix_value() (in module libscientific.matrix) get_ploadings() (libscientific.pls.PLS method), [1] get_posix_library() (in module libscientific.loadlibrary)

get_qloadings() (libscientific.pls.PLS method), [1] get_scores() (libscientific.pca.PCA method), [1] get_super_scores() (libscientific.cpca.CPCA method), [1] get_super_weights() (libscientific.cpca.CPCA method), [1] get_total_exp_variance() (libscientific.cpca.CPCA method), [1] get_tscores() (libscientific.pls.PLS method), [1] get_uivector_value() (in module libscientific.vector) get_uscores() (libscientific.pls.PLS method), [1] get_weights() (libscientific.pls.PLS method), [1] get_x_averages() (libscientific.pls.PLS method), [1] get_x_column_scaling() (libscientific.pls.PLS method), [1] get_y_averages() (libscientific.pls.PLS method), [1] get_y_column_scaling() (libscientific.pls.PLS method), [1] GetLVCCutoff (C function) GetResidualMatrix (C function)

I

init_dvector() (in module libscientific.vector) init_dvector_list() (in module libscientific.vectlist) init_ivector() (in module libscientific.vector) init_matrix() (in module libscientific.matrix) init_tensor() (in module libscientific.tensor) init_uivector() (in module libscientific.vector) initDVector (C function) initIVector (C function) initMatrix (C function)

initStrVector (C function) initTensor (C function) initUIVector (C function) ivector (C struct) IVECTOR (class in libscientific.vector) ivector_append() (in module libscientific.vector) ivector_remove_at() (in module libscientific.vector) ivector_tolist() (in module libscientific.vector) IVectorAppend (C function) IVectorRemoveAt (C function)

K

k_means_plus_plus() (in module libscientific.clustering)

L

LDA (C function) LDAMODEL (C struct) LDAMulticlassStatistics (C function) LDAPrediction (C function) LDAStatistics (C function) libscientific module libscientific.clustering module libscientific.cpca module libscientific.interpolate module libscientific.loadlibrary module libscientific.matrix module libscientific.misc module

libscientific.pca module libscientific.pls module libscientific.tensor module libscientific.vectlist module libscientific.vector module load() (libscientific.cpca.CPCA method) (libscientific.pca.PCA method) (libscientific.pls.PLS method) load_library_for_nt() (in module libscientific.loadlibrary) load_library_for_posix() (in module libscientific.loadlibrary) load_libscientific_library() (in module libscientific.loadlibrary) loadings (libscientific.pca.PCAMODEL attribute)

M

m (libscientific.tensor.TENSOR attribute) matrix (C struct) MATRIX (class in libscientific.matrix) Matrix (class in libscientific.matrix) matrix_append_col() (in module libscientific.matrix) matrix_append_row() (in module libscientific.matrix) matrix_check() (in module libscientific.matrix) matrix_copy() (in module libscientific.matrix) matrix_dot_product() (in module libscientific.matrix) matrix_dvector_dot_product() (in module libscientific.matrix) matrix_from_numpy() (in module libscientific.matrix) matrix_inversion() (in module libscientific.matrix) matrix_set() (in module libscientific.matrix) matrix_to_list() (in module libscientific.matrix) matrix_transpose() (in module libscientific.matrix) MatrixAppendCol (C function) MatrixAppendRow (C function) MatrixDeleteColAt (C function) MatrixDeleteRowAt (C function) max_dissimilarity_selection() (in module libscientific.clustering) missing_value() (in module libscientific.misc) MLR (C function)

MLRMODEL (C struct) MLRPredictY (C function) MLRRegressionStatistics (C function) model (libscientific.cpca.CPCA attribute) module libscientific libscientific.clustering libscientific.cpca libscientific.interpolate libscientific.loadlibrary libscientific.matrix libscientific.misc libscientific.pca libscientific.pls libscientific.tensor libscientific.vectlist libscientific.vector most_descriptive_compound() (in module libscientific.clustering) mpca (libscientific.pca.PCA attribute) mpls (libscientific.pls.PLS attribute) mt_dvector_matrix_dot_product() (in module libscientific.matrix) mt_matrix_dvector_dot_product() (in module libscientific.matrix) mtx (libscientific.matrix.Matrix attribute)

N

ncol() (libscientific.matrix.Matrix method), [1] (libscientific.tensor.Tensor method), [1] new_cpca_model() (in module libscientific.cpca) new_dvector() (in module libscientific.vector) new_dvector_list() (in module libscientific.vectlist) new_ivector() (in module libscientific.vector) new_matrix() (in module libscientific.matrix) new_matrix_from_csv() (in module libscientific.matrix) new_matrix_from_list() (in module libscientific.matrix) new_pca_model() (in module libscientific.pca) new_pls_model() (in module libscientific.pls) new_tensor() (in module libscientific.tensor) new_tensor_matrix() (in module libscientific.tensor) new_uivector() (in module libscientific.vector) NewCPCAModel (C function) NewDVector (C function)

NewIVector (C function) NewLDAModel (C function) NewMatrix (C function) NewMLRModel (C function) NewPCAModel (C function) NewPLSModel (C function) NewStrVector (C function) NewTensor (C function) NewTensorMatrix (C function) NewUIVector (C function) NewUPCAModel (C function) nlv (libscientific.pls.PLS attribute) npc (libscientific.cpca.CPCA attribute) (libscientific.pca.PCA attribute) nrow() (libscientific.matrix.Matrix method), [1] (libscientific.tensor.Tensor method), [1]

O

order (libscientific.tensor.TENSOR attribute)

order() (libscientific.tensor.Tensor method), [1]

P

PCA (C function) (class in libscientific.pca) pca_algorithm() (in module libscientific.pca) pca_ind_var_predictor() (in module libscientific.pca) pca_score_predictor() (in module libscientific.pca) PCAIndVarPredictor (C function) PCAMODEL (C struct) (class in libscientific.pca) PCAScorePredictor (C function) PLS (C function) (class in libscientific.pls) pls_algorithm() (in module libscientific.pls) pls_beta_coefficients() (in module libscientific.pls) pls_beta_inference() (in module libscientific.pls) pls_score_predictor() (in module libscientific.pls) pls_y_predictor() (in module libscientific.pls) pls_y_predictor_all_lv() (in module libscientific.pls) PLSBetasCoeff (C function) PLSDiscriminantAnalysisStatistics (C function) PLSMODEL (C struct) (class in libscientific.pls) PLSRegressionStatistics (C function) PLSScorePredictor (C function) PLSYPredictor (C function) PLSYPredictorAllLV (C function) precision_recall_ap_recalculated (libscientific.pls.PLSMODEL attribute) precision_recall_ap_validation (libscientific.pls.PLSMODEL attribute)

precision_recall_recalculated (libscientific.pls.PLSMODEL attribute) precision_recall_validation (libscientific.pls.PLSMODEL attribute) pred_residuals (libscientific.pls.PLSMODEL attribute) predict() (libscientific.cpca.CPCA method), [1] (libscientific.interpolate.CubicSplineInterpolation method) (libscientific.pca.PCA method), [1] (libscientific.pls.PLS method), [1] predicted_y (libscientific.pls.PLSMODEL attribute) print_cpca() (in module libscientific.cpca) print_dvector() (in module libscientific.vector) print_matrix() (in module libscientific.matrix) print_pca() (in module libscientific.pca) print_pls() (in module libscientific.pls) print_tensor() (in module libscientific.tensor) print_uivector() (in module libscientific.vector) PrintCPCA (C function) PrintDVector (C function) PrintIVector (C function) PrintLDAModel (C function) PrintMatrix (C function) PrintMLR (C function) PrintPCA (C function) PrintPLSModel (C function) PrintStrVector (C function) PrintTensor (C function) PrintUIVector (C function) PrintUPCAModel (C function)

Q

q2y (libscientific.pls.PLSMODEL attribute)

R

r2y_recalculated (libscientific.pls.PLSMODEL attribute) r2y_validation (libscientific.pls.PLSMODEL attribute) read_cpca() (in module libscientific.cpca) read_pca() (in module libscientific.pca) read_pls() (in module libscientific.pls) recalc_residuals (libscientific.pls.PLSMODEL attribute) recalculated_y (libscientific.pls.PLSMODEL attribute) reconstruct_original_matrix() (libscientific.pca.PCA method), [1]

resize_matrix() (in module libscientific.matrix) revert_scaling() (in module libscientific.pls) roc_auc_recalculated (libscientific.pls.PLSMODEL attribute) roc_auc_validation (libscientific.pls.PLSMODEL attribute) roc_recalculated (libscientific.pls.PLSMODEL attribute) roc_validation (libscientific.pls.PLSMODEL attribute) row (libscientific.matrix.MATRIX attribute) row_col_outer_product() (in module libscientific.matrix)

S

s_interp (libscientific.interpolate.CubicSplineInterpolation attribute) save() (libscientific.cpca.CPCA method) (libscientific.pca.PCA method) (libscientific.pls.PLS method) scaling (libscientific.cpca.CPCA attribute) (libscientific.pca.PCA attribute) scaling_factor (libscientific.cpca.CPCAMODEL attribute) scores (libscientific.pca.PCAMODEL attribute) sdec (libscientific.pls.PLSMODEL attribute) sdep (libscientific.pls.PLSMODEL attribute) set_dvector_value() (in module libscientific.vector) set_ivector_value() (in module libscientific.vector) set_matrix_value() (in module libscientific.matrix) set_missing_matrix_value() (in module libscientific.matrix) set_tensor_value() (in module libscientific.tensor) set_uivector_value() (in module libscientific.vector)

size (libscientific.vectlist.DVECTLIST attribute) (libscientific.vector.DVECTOR attribute) (libscientific.vector.IVECTOR attribute) (libscientific.vector.STRVECTOR attribute) (libscientific.vector.UIVECTOR attribute) size() (libscientific.vectlist.DVectorList method), [1] (libscientific.vector.DVector method), [1] (libscientific.vector.UIVector method), [1] strvector (C struct) STRVECTOR (class in libscientific.vector) StrVectorAppend (C function) super_scores (libscientific.cpca.CPCAMODEL attribute) super_weights (libscientific.cpca.CPCAMODEL attribute) svd() (in module libscientific.matrix) (libscientific.matrix.Matrix method), [1] svd_lapack() (in module libscientific.matrix)

T

tensor (C struct) TENSOR (class in libscientific.tensor) Tensor (class in libscientific.tensor) tensor_append_column() (in module libscientific.tensor) tensor_append_row() (in module libscientific.tensor) tensor_copy() (in module libscientific.tensor) tensor_set() (in module libscientific.tensor) tensor_tolist() (in module libscientific.tensor)

tns (libscientific.tensor.Tensor attribute) tolist() (libscientific.matrix.Matrix method), [1] (libscientific.tensor.Tensor method), [1] (libscientific.vectlist.DVectorList method), [1] (libscientific.vector.DVector method), [1] (libscientific.vector.UIVector method), [1] total_expvar (libscientific.cpca.CPCAMODEL attribute) transpose() (libscientific.matrix.Matrix method), [1]

U

uivect (libscientific.vector.UIVector attribute) uivector (C struct) UIVECTOR (class in libscientific.vector) UIVector (class in libscientific.vector) uivector_append() (in module libscientific.vector) uivector_remove_at() (in module libscientific.vector) uivector_resize() (in module libscientific.vector)

uivector_tolist() (in module libscientific.vector) UIVectorAppend (C function) UIVectorRemoveAt (C function) UPCA (C function) UPCAIndVarPredictor (C function) UPCAMODEL (C struct) UPCAScorePredictor (C function)

V

val_in_matrix() (in module libscientific.matrix)

varexp (libscientific.pca.PCAMODEL attribute)

W

write_cpca() (in module libscientific.cpca)

write_pca() (in module libscientific.pca) write_pls() (in module libscientific.pls)

X

xcolaverage (libscientific.pls.PLSMODEL attribute) xcolscaling (libscientific.pls.PLSMODEL attribute) xloadings (libscientific.pls.PLSMODEL attribute) xscaling (libscientific.pls.PLS attribute)

xscores (libscientific.pls.PLSMODEL attribute) xvarexp (libscientific.pls.PLSMODEL attribute) xvector_tolist() (in module libscientific.vector) xweights (libscientific.pls.PLSMODEL attribute)

Y

ycolaverage (libscientific.pls.PLSMODEL attribute) ycolscaling (libscientific.pls.PLSMODEL attribute) yloadings (libscientific.pls.PLSMODEL attribute)

yscaling (libscientific.pls.PLS attribute) yscores (libscientific.pls.PLSMODEL attribute) yscrambling (libscientific.pls.PLSMODEL attribute)